Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_04275 | Not Available | Negative | 923085 - 923522 | 16699.3 |
| thymidine kinase | BKM63_04280 | Not Available | Negative | 923553 - 924143 | 22059.4 |
| hypothetical protein | BKM63_04285 | Not Available | Positive | 924379 - 925410 | 39023.8 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | BKM63_04290 | Not Available | Positive | 925523 - 926236 | 26450.1 |
| type iii effector | BKM63_04295 | Not Available | Positive | 926431 - 926775 | 12698.8 |
| single-stranded-dna-specific exonuclease recj | BKM63_04300 | Not Available | Positive | 926966 - 928678 | 64234.5 |
| mfs transporter | BKM63_04305 | Not Available | Positive | 928668 - 929948 | 46244.8 |
| alpha/beta hydrolase | BKM63_04310 | Not Available | Positive | 929949 - 930863 | 34703.5 |
| hypothetical protein | BKM63_04315 | Not Available | Positive | 930942 - 931298 | 13768.5 |
| hypothetical protein | BKM63_04320 | Not Available | Positive | 931382 - 932593 | 45825.5 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
