Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | BKM63_04225 | Not Available | Positive | 908447 - 909154 | 25563.2 |
| ribosome recycling factor | BKM63_04230 | Not Available | Positive | 909223 - 909786 | 20697.8 |
| hypothetical protein | BKM63_04235 | Not Available | Positive | 909904 - 912399 | 95662.2 |
| cation/h(+) antiporter | BKM63_04240 | Not Available | Negative | 912609 - 914879 | 83786.1 |
| two-component system response regulator | BKM63_04245 | Not Available | Negative | 914993 - 915712 | 27562.7 |
| histidine kinase | BKM63_04250 | Not Available | Negative | 915675 - 916436 | 29407.9 |
| qace family quaternary ammonium compound efflux smr transporter | BKM63_04255 | Not Available | Negative | 916573 - 916902 | 11874.0 |
| transporter | BKM63_04260 | Not Available | Positive | 917080 - 919446 | 88904.4 |
| asparagine--trna ligase | BKM63_04265 | Not Available | Positive | 919760 - 921205 | 54850.2 |
| rna polymerase sigma-54 factor | BKM63_04270 | Not Available | Positive | 921358 - 922818 | 56228.4 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
