Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dolichyl-phosphate beta-d-mannosyltransferase | BKM63_04125 | Not Available | Negative | 888077 - 888802 | 27520.5 |
| duf4271 domain-containing protein | BKM63_04130 | Not Available | Positive | 888909 - 889577 | 25917.0 |
| uroporphyrinogen-iii synthase | BKM63_04135 | Not Available | Positive | 889592 - 890341 | 28649.6 |
| transcriptional regulator | BKM63_04140 | Not Available | Positive | 890595 - 891065 | 17624.7 |
| hypothetical protein | BKM63_04145 | Not Available | Negative | 891211 - 891897 | 25070.7 |
| dna-binding response regulator | BKM63_04150 | Not Available | Negative | 891998 - 892633 | 23656.1 |
| two-component sensor histidine kinase | BKM63_04155 | Not Available | Negative | 892626 - 894638 | 77262.0 |
| hypothetical protein | BKM63_04160 | Not Available | Positive | 894806 - 895207 | 13892.3 |
| hypothetical protein | BKM63_04165 | Not Available | Negative | 895277 - 895873 | 23634.3 |
| rna polymerase subunit sigma-24 | BKM63_04170 | Not Available | Negative | 895860 - 896333 | 18717.6 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
