Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-7-phosphoheptulonate synthase | BKM63_03925 | Not Available | Negative | 842331 - 843413 | 40626.1 |
| prephenate dehydrogenase | BKM63_03930 | Not Available | Negative | 843426 - 844283 | 31713.4 |
| aminotransferase | BKM63_03935 | Not Available | Negative | 844449 - 845594 | 42859.6 |
| prephenate dehydratase | BKM63_03940 | Not Available | Negative | 845679 - 846518 | 31730.5 |
| twin-arginine translocation pathway signal sequence domain protein precursor | BKM63_03945 | Not Available | Negative | 847053 - 848219 | 43280.4 |
| hypothetical protein | BKM63_03950 | Not Available | Negative | 848232 - 849629 | 53995.6 |
| ribonucleoside-diphosphate reductase subunit alpha | BKM63_03955 | Not Available | Negative | 849907 - 852297 | 90857.5 |
| ribonucleoside-diphosphate reductase | BKM63_03960 | Not Available | Negative | 852564 - 853541 | 37687.8 |
| hypothetical protein | BKM63_03965 | Not Available | Negative | 853880 - 854449 | 21147.2 |
| hypothetical protein | BKM63_03970 | Not Available | Positive | 854805 - 855383 | 20639.3 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
