Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter substrate-binding protein | BKM63_03705 | Not Available | Positive | 790546 - 792963 | 92355.8 |
| short-chain dehydrogenase | BKM63_03710 | Not Available | Negative | 793061 - 793798 | 26667.3 |
| cyclic nucleotide-binding protein | BKM63_03715 | Not Available | Negative | 793876 - 794445 | 21881.4 |
| hypothetical protein | BKM63_03720 | Not Available | Negative | 794551 - 795891 | 50946.3 |
| endonuclease v | BKM63_03725 | Not Available | Negative | 795899 - 796402 | 19276.4 |
| hypothetical protein | BKM63_03730 | Not Available | Negative | 796421 - 796984 | 21897.8 |
| hypothetical protein | BKM63_03735 | Not Available | Negative | 797047 - 797640 | 22951.8 |
| Trna-ala | Not Available | Not Available | Positive | 801422 - 801498 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 801603 - 801679 | Not Available |
| transmembrane permease | BKM63_03765 | Not Available | Negative | 804176 - 805411 | 46639.4 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
