Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | BKM63_03005 | Not Available | Negative | 644707 - 645552 | 31714.0 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | BKM63_03010 | Not Available | Negative | 645552 - 646100 | 20601.4 |
| pyridoxal phosphate-dependent aminotransferase | BKM63_03015 | Not Available | Negative | 646124 - 647260 | 42761.0 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 647298 - 648815 | Not Available |
| hypothetical protein | BKM63_03020 | Not Available | Negative | 647253 - 647678 | 16110.8 |
| udp-glcnac--udp-phosphate glcnac-1-phosphate transferase | BKM63_03025 | Not Available | Negative | 647675 - 648640 | 37111.7 |
| nucleoside-diphosphate-sugar epimerase | BKM63_03030 | Not Available | Negative | 648640 - 649542 | 33541.5 |
| hypothetical protein | BKM63_03035 | Not Available | Negative | 649563 - 650714 | 44489.1 |
| hypothetical protein | BKM63_03040 | Not Available | Negative | 650754 - 651584 | 32362.2 |
| hypothetical protein | BKM63_03045 | Not Available | Negative | 651630 - 652745 | 41939.6 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
