Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_02965 | Not Available | Negative | 635667 - 636833 | 46101.0 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | BKM63_02970 | Not Available | Negative | 636826 - 637953 | 42963.3 |
| hypothetical protein | BKM63_02975 | Not Available | Negative | 637953 - 638582 | 22871.1 |
| hypothetical protein | BKM63_02980 | Not Available | Negative | 638653 - 639345 | 27300.4 |
| abc transporter atp-binding protein | BKM63_02985 | Not Available | Negative | 639347 - 640621 | 47009.2 |
| abc transporter permease | BKM63_02990 | Not Available | Negative | 640667 - 641533 | 32893.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 643614 - 643723 | Not Available |
| polysaccharide biosynthesis protein | BKM63_02995 | Not Available | Negative | 641702 - 643669 | 74159.1 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 643880 - 646770 | Not Available |
| glucose-1-phosphate thymidylyltransferase | BKM63_03000 | Not Available | Negative | 643752 - 644636 | 32602.5 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
