Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 588849 - 588925 | Not Available |
| hypothetical protein | BKM63_02720 | Not Available | Negative | 589002 - 589268 | 9788.79 |
| mannose-6-phosphate isomerase | BKM63_02725 | Not Available | Negative | 589326 - 590294 | 36402.3 |
| peroxiredoxin | BKM63_02730 | Not Available | Negative | 590356 - 590814 | 17198.8 |
| 6-pyruvoyl tetrahydrobiopterin synthase | BKM63_02735 | Not Available | Negative | 590818 - 591228 | 15686.7 |
| isopentenyl-diphosphate delta-isomerase | BKM63_02740 | Not Available | Negative | 591250 - 591777 | 20851.6 |
| peptide-methionine (r)-s-oxide reductase | BKM63_02745 | Not Available | Positive | 592074 - 592628 | 20793.7 |
| peptide-methionine (s)-s-oxide reductase | BKM63_02750 | Not Available | Positive | 592653 - 593243 | 22120.3 |
| carboxymuconolactone decarboxylase | BKM63_02755 | Not Available | Positive | 593606 - 594058 | 16993.2 |
| transcription initiation protein | BKM63_02760 | Not Available | Positive | 594138 - 594476 | 12658.1 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
