Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_02360 | Not Available | Negative | 499944 - 501233 | 49419.1 |
| x-pro dipeptidase | BKM63_02370 | Not Available | Positive | 503467 - 504687 | 44828.5 |
| hypothetical protein | BKM63_02375 | Not Available | Negative | 504927 - 508730 | 136100.0 |
| hypothetical protein | BKM63_02380 | Not Available | Negative | 509034 - 510491 | 53956.9 |
| susc/raga family tonb-linked outer membrane protein | BKM63_02385 | Not Available | Negative | 510504 - 513710 | 116730.0 |
| s9 family peptidase | BKM63_02390 | Not Available | Negative | 514100 - 516262 | 82233.5 |
| x-pro aminopeptidase | BKM63_02395 | Not Available | Negative | 516259 - 517563 | 49653.6 |
| amino acid dehydrogenase | BKM63_02400 | Not Available | Negative | 517567 - 518802 | 45508.5 |
| hydroxyproline-2-epimerase | BKM63_02405 | Not Available | Negative | 518876 - 519886 | 37088.3 |
| aldehyde dehydrogenase (nadp(+)) | BKM63_02410 | Not Available | Negative | 519886 - 521472 | 56699.2 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
