Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | BKM63_02260 | Not Available | Positive | 476661 - 477221 | 21678.3 |
| copper-translocating p-type atpase | BKM63_02265 | Not Available | Positive | 477451 - 479985 | 91430.7 |
| copper oxidase | BKM63_02270 | Not Available | Positive | 479995 - 482277 | 87558.4 |
| thioesterase | BKM63_02275 | Not Available | Negative | 482895 - 483347 | 16771.5 |
| hypothetical protein | BKM63_02280 | Not Available | Positive | 483603 - 484058 | 17106.0 |
| padr family transcriptional regulator | BKM63_02285 | Not Available | Positive | 484185 - 484517 | 12502.0 |
| hypothetical protein | BKM63_02290 | Not Available | Positive | 484521 - 486248 | 65164.7 |
| duf2807 domain-containing protein | BKM63_02295 | Not Available | Positive | 486252 - 486986 | 25640.5 |
| duf2807 domain-containing protein | BKM63_02300 | Not Available | Positive | 487071 - 487904 | 30822.2 |
| thioredoxin-disulfide reductase | BKM63_02305 | Not Available | Negative | 488048 - 488995 | 34135.7 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
