Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase expression/formation protein hype | BKM63_22890 | Not Available | Negative | 5384637 - 5385647 | 36482.0 |
| hydrogenase assembly protein hupf | BKM63_22895 | Not Available | Negative | 5385657 - 5385893 | 8526.47 |
| hydrogenase accessory protein hypb | BKM63_22900 | Not Available | Negative | 5385897 - 5386712 | 31220.7 |
| hypothetical protein | BKM63_22905 | Not Available | Negative | 5386774 - 5387115 | 12713.6 |
| hydrogenase | BKM63_22910 | Not Available | Positive | 5387299 - 5388426 | 40442.2 |
| hydrogenase | BKM63_22915 | Not Available | Positive | 5388445 - 5390181 | 64454.7 |
| ni/fe-hydrogenase, b-type cytochrome subunit | BKM63_22920 | Not Available | Positive | 5390192 - 5390953 | 29322.8 |
| hydrogenase maturation protease | BKM63_22925 | Not Available | Positive | 5390990 - 5391481 | 18130.1 |
| hypothetical protein | BKM63_22930 | Not Available | Negative | 5391630 - 5391830 | 7475.1 |
| hypothetical protein | BKM63_22935 | Not Available | Positive | 5391968 - 5393767 | 68189.5 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
