Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mutarotase | BKM63_22790 | Not Available | Positive | 5357244 - 5357924 | 26395.4 |
| glyoxalase | BKM63_22795 | Not Available | Negative | 5357969 - 5358331 | 14274.9 |
| hypothetical protein | BKM63_22800 | Not Available | Negative | 5358351 - 5359028 | 25525.1 |
| sodium:proton antiporter | BKM63_22805 | Not Available | Negative | 5359120 - 5361267 | 79283.9 |
| l-serine ammonia-lyase | BKM63_22810 | Not Available | Positive | 5361586 - 5363013 | 52310.2 |
| ligand-binding protein sh3 | BKM63_22815 | Not Available | Positive | 5363105 - 5364301 | 45714.4 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | BKM63_22820 | Not Available | Positive | 5364352 - 5365170 | 29623.1 |
| four helix bundle protein | BKM63_22825 | Not Available | Positive | 5365296 - 5365646 | 13297.0 |
| rna pseudouridine synthase | BKM63_22830 | Not Available | Positive | 5365703 - 5366392 | 25883.2 |
| aldehyde dehydrogenase | BKM63_22835 | Not Available | Positive | 5366468 - 5367796 | 49921.6 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
