Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfce family phosphodiesterase | BKM63_22590 | Not Available | Negative | 5319496 - 5319990 | 18685.8 |
| trna pseudouridine(38-40) synthase trua | BKM63_22595 | Not Available | Positive | 5320295 - 5321029 | 28315.8 |
| antibiotic abc transporter atp-binding protein | BKM63_22600 | Not Available | Positive | 5321121 - 5322875 | 66911.0 |
| histidine kinase | BKM63_22605 | Not Available | Positive | 5322932 - 5324467 | 59935.4 |
| metalloprotease | BKM63_22610 | Not Available | Positive | 5324553 - 5327150 | 99283.7 |
| susc/raga family protein | BKM63_22615 | Not Available | Positive | 5327166 - 5330504 | 124052.0 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_22620 | Not Available | Positive | 5330516 - 5331835 | 50040.3 |
| dna-binding response regulator | BKM63_22625 | Not Available | Positive | 5331989 - 5332753 | 29236.3 |
| hypothetical protein | BKM63_22630 | Not Available | Positive | 5332976 - 5333560 | 22797.8 |
| dihydrolipoyl dehydrogenase | BKM63_22635 | Not Available | Positive | 5333944 - 5335332 | 49430.8 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
