Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calpastatin | BKM63_22540 | Not Available | Negative | 5309620 - 5310069 | 17078.7 |
| ornithine--oxo-acid transaminase | BKM63_22545 | Not Available | Negative | 5310265 - 5311518 | 45973.1 |
| asnc family transcriptional regulator | BKM63_22550 | Not Available | Positive | 5311714 - 5312166 | 17184.9 |
| dienelactone hydrolase | BKM63_22555 | Not Available | Positive | 5312276 - 5313049 | 27996.5 |
| hypothetical protein | BKM63_22560 | Not Available | Positive | 5313135 - 5314124 | 39654.7 |
| peptidase m28 | BKM63_22565 | Not Available | Positive | 5314131 - 5315147 | 38141.9 |
| transcription termination factor rho | BKM63_22570 | Not Available | Negative | 5315304 - 5317112 | 66934.8 |
| transcription termination factor rho | BKM63_22575 | Not Available | Positive | 5317297 - 5317713 | 15694.1 |
| dna-binding response regulator | BKM63_22580 | Not Available | Positive | 5317872 - 5318534 | 24882.3 |
| histidine kinase | BKM63_22585 | Not Available | Positive | 5318573 - 5319493 | 34986.6 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
