Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | BKM63_02060 | Not Available | Positive | 437292 - 438239 | 35049.5 |
| dna-binding protein | BKM63_02065 | Not Available | Positive | 438420 - 438692 | 9230.17 |
| transcriptional regulator | BKM63_02070 | Not Available | Positive | 438821 - 439381 | 21138.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 440171 - 440280 | Not Available |
| aminotransferase class iv | BKM63_02075 | Not Available | Negative | 439378 - 440214 | 31573.5 |
| hypothetical protein | BKM63_02080 | Not Available | Negative | 440269 - 440661 | 15166.8 |
| Trna-met | Not Available | Not Available | Positive | 440812 - 440888 | Not Available |
| hypothetical protein | BKM63_02090 | Not Available | Positive | 441022 - 441276 | 9678.57 |
| rna polymerase subunit sigma-24 | BKM63_02095 | Not Available | Positive | 441673 - 442194 | 20650.8 |
| hypothetical protein | BKM63_02100 | Not Available | Positive | 442241 - 442450 | 8231.14 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
