Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rossman fold protein, tigr00730 family | BKM63_21690 | Not Available | Positive | 5100463 - 5101191 | 27531.2 |
| aminopeptidase | BKM63_21695 | Not Available | Positive | 5101405 - 5104152 | 107977.0 |
| transketolase | BKM63_21700 | Not Available | Positive | 5104340 - 5106754 | 90475.2 |
| 3-deoxy-d-manno-octulosonate cytidylyltransferase | BKM63_21705 | Not Available | Negative | 5107025 - 5107759 | 27458.0 |
| pyrrolo-quinoline quinone | BKM63_21710 | Not Available | Positive | 5107890 - 5109218 | 49541.4 |
| 4,5-dopa dioxygenase extradiol | BKM63_21715 | Not Available | Negative | 5109378 - 5110208 | 31017.2 |
| atp-dependent endonuclease | BKM63_21720 | Not Available | Negative | 5110287 - 5111696 | 53862.3 |
| hypothetical protein | BKM63_21725 | Not Available | Positive | 5112015 - 5112836 | 32102.7 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | BKM63_21730 | Not Available | Positive | 5112833 - 5113438 | 22795.7 |
| tonb-dependent receptor | BKM63_21735 | Not Available | Negative | 5113522 - 5115639 | 81589.9 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
