Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_21640 | Not Available | Positive | 5084864 - 5086633 | 64932.8 |
| hypothetical protein | BKM63_21645 | Not Available | Negative | 5086782 - 5087471 | 25433.7 |
| rhomboid family intramembrane serine protease | BKM63_21650 | Not Available | Negative | 5087524 - 5088162 | 23640.9 |
| lipid a biosynthesis acyltransferase | BKM63_21655 | Not Available | Positive | 5088275 - 5089147 | 34815.0 |
| hypothetical protein | BKM63_21660 | Not Available | Positive | 5089338 - 5090822 | 55336.6 |
| phosphoglucosamine mutase | BKM63_21665 | Not Available | Negative | 5090997 - 5092385 | 49850.0 |
| acp phosphodiesterase | BKM63_21670 | Not Available | Positive | 5092725 - 5093309 | 23288.6 |
| gamma-glutamyltransferase | BKM63_21675 | Not Available | Positive | 5093344 - 5095026 | 60922.5 |
| chloride channel protein | BKM63_21680 | Not Available | Positive | 5095109 - 5096893 | 64786.2 |
| excinuclease abc subunit a | BKM63_21685 | Not Available | Positive | 5097026 - 5099860 | 105672.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
