Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | BKM63_21490 | Not Available | Negative | 5033428 - 5034921 | 55601.9 |
| susc/raga family tonb-linked outer membrane protein | BKM63_21495 | Not Available | Negative | 5034935 - 5037943 | 107985.0 |
| hypothetical protein | BKM63_21500 | Not Available | Negative | 5038562 - 5042698 | 157367.0 |
| alpha-glucosidase | BKM63_21505 | Not Available | Negative | 5042759 - 5044705 | 71839.7 |
| glycosyl hydrolase | BKM63_21510 | Not Available | Negative | 5044755 - 5047349 | 96565.5 |
| glycoside hydrolase | BKM63_21515 | Not Available | Negative | 5047393 - 5048961 | 59509.1 |
| glycosyl hydrolase | BKM63_21520 | Not Available | Negative | 5048995 - 5051292 | 87260.0 |
| glycosyhydrolase | BKM63_21525 | Not Available | Negative | 5051319 - 5053856 | 96908.5 |
| esterase | BKM63_21530 | Not Available | Negative | 5053863 - 5055770 | 71162.1 |
| gdsl family lipase | BKM63_21535 | Not Available | Negative | 5056657 - 5057889 | 45107.1 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
