Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_21440 | Not Available | Positive | 5013162 - 5014739 | 61855.9 |
| glycosyl hydrolase | BKM63_21445 | Not Available | Positive | 5015783 - 5018074 | 84219.9 |
| hypothetical protein | BKM63_21450 | Not Available | Positive | 5018097 - 5018294 | 7731.78 |
| hypothetical protein | BKM63_21455 | Not Available | Positive | 5018291 - 5022445 | 158800.0 |
| susc/raga family tonb-linked outer membrane protein | BKM63_21460 | Not Available | Positive | 5022886 - 5025990 | 114059.0 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_21465 | Not Available | Positive | 5026051 - 5027574 | 56102.6 |
| hypothetical protein | BKM63_21470 | Not Available | Positive | 5027583 - 5028686 | 38820.7 |
| 1,4-beta-xylanase | BKM63_21475 | Not Available | Positive | 5028823 - 5030214 | 51617.6 |
| glycoside hydrolase | BKM63_21480 | Not Available | Positive | 5030271 - 5031197 | 34268.8 |
| mfs transporter | BKM63_21485 | Not Available | Positive | 5031654 - 5033156 | 55982.4 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
