Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | BKM63_21135 | Not Available | Positive | 4943032 - 4944231 | 45325.2 |
| arac family transcriptional regulator | BKM63_21145 | Not Available | Negative | 4945756 - 4946778 | 38760.4 |
| dna-deoxyinosine glycosylase | BKM63_21150 | Not Available | Positive | 4946963 - 4947445 | 18315.0 |
| hypothetical protein | BKM63_21155 | Not Available | Positive | 4947769 - 4948203 | 17479.3 |
| hypothetical protein | BKM63_21160 | Not Available | Negative | 4948368 - 4949540 | 46350.1 |
| hypothetical protein | BKM63_21165 | Not Available | Positive | 4949906 - 4950820 | 34789.2 |
| alpha-glucosidase | BKM63_21170 | Not Available | Negative | 4951128 - 4953146 | 76479.1 |
| hypothetical protein | BKM63_21175 | Not Available | Negative | 4953172 - 4954416 | 46675.2 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_21180 | Not Available | Negative | 4954491 - 4956005 | 56919.6 |
| susc/raga family tonb-linked outer membrane protein | BKM63_21185 | Not Available | Negative | 4956030 - 4959011 | 108166.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
