Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxygluconokinase | BKM63_20835 | Not Available | Negative | 4872924 - 4873946 | 37375.0 |
| glucuronate isomerase | BKM63_20840 | Not Available | Negative | 4874045 - 4875451 | 53991.7 |
| gluconate 5-dehydrogenase | BKM63_20845 | Not Available | Negative | 4875477 - 4876268 | 28062.9 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | BKM63_20850 | Not Available | Negative | 4876274 - 4877116 | 31427.3 |
| mfs transporter | BKM63_20855 | Not Available | Negative | 4877213 - 4878529 | 48954.5 |
| mfs transporter | BKM63_20860 | Not Available | Negative | 4878576 - 4880045 | 54285.3 |
| alpha/beta hydrolase | BKM63_20865 | Not Available | Positive | 4880444 - 4881385 | 34697.6 |
| peptidase | BKM63_20870 | Not Available | Negative | 4881471 - 4882901 | 53815.8 |
| hypothetical protein | BKM63_20875 | Not Available | Negative | 4882976 - 4884217 | 44418.4 |
| energy transducer tonb | BKM63_20880 | Not Available | Negative | 4884244 - 4886643 | 90555.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
