Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 88 | BKM63_20780 | Not Available | Negative | 4856542 - 4857750 | 46456.6 |
| glycosyl hydrolase family 88 | BKM63_20785 | Not Available | Negative | 4857763 - 4858962 | 45545.8 |
| duf4861 domain-containing protein | BKM63_20790 | Not Available | Negative | 4859022 - 4859987 | 36441.6 |
| esterase | BKM63_20795 | Not Available | Negative | 4859990 - 4860934 | 35546.3 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_20800 | Not Available | Negative | 4861040 - 4862713 | 61883.8 |
| susc/raga family tonb-linked outer membrane protein | BKM63_20805 | Not Available | Negative | 4862726 - 4865830 | 113048.0 |
| glycoside hydrolase | BKM63_20810 | Not Available | Negative | 4865866 - 4867305 | 52886.5 |
| laci family transcriptional regulator | BKM63_20815 | Not Available | Positive | 4867596 - 4868624 | 38281.9 |
| altronate hydrolase | BKM63_20820 | Not Available | Negative | 4868929 - 4870551 | 58116.6 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | BKM63_20830 | Not Available | Negative | 4872243 - 4872911 | 24096.3 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
