Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_20730 | Not Available | Negative | 4844237 - 4844482 | 10002.3 |
| dna primase | BKM63_20735 | Not Available | Positive | 4844796 - 4845692 | 34489.4 |
| conjugal transfer protein trag | BKM63_20740 | Not Available | Positive | 4845731 - 4847713 | 74748.8 |
| hypothetical protein | BKM63_20745 | Not Available | Positive | 4847814 - 4848191 | 15068.4 |
| hypothetical protein | BKM63_20750 | Not Available | Positive | 4848179 - 4849273 | 40632.7 |
| rhamnogalacturonan acetylesterase | BKM63_20755 | Not Available | Negative | 4849287 - 4850030 | 28592.1 |
| glycoside hydrolase | BKM63_20760 | Not Available | Negative | 4850136 - 4851485 | 49997.1 |
| pectate lyase | BKM63_20765 | Not Available | Negative | 4851589 - 4853592 | 75718.9 |
| glycoside hydrolase | BKM63_20770 | Not Available | Negative | 4853603 - 4855201 | 59869.2 |
| glycosyl hydrolase family 88 | BKM63_20775 | Not Available | Negative | 4855299 - 4856519 | 46621.9 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
