Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exopolygalacturonase | BKM63_20475 | Not Available | Negative | 4779387 - 4780712 | 49561.3 |
| hypothetical protein | BKM63_20480 | Not Available | Positive | 4780681 - 4780902 | 8477.73 |
| duf4861 domain-containing protein | BKM63_20485 | Not Available | Negative | 4780845 - 4782137 | 48096.1 |
| l-rhamnose mutarotase | BKM63_20490 | Not Available | Negative | 4782175 - 4782498 | 12617.0 |
| glycosyl hydrolase family 43 | BKM63_20495 | Not Available | Negative | 4782509 - 4783579 | 40683.4 |
| 9-o-acetylesterase | BKM63_20500 | Not Available | Negative | 4783664 - 4785196 | 57041.2 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_20505 | Not Available | Negative | 4785355 - 4786890 | 56676.2 |
| susc/raga family tonb-linked outer membrane protein | BKM63_20510 | Not Available | Negative | 4786897 - 4790040 | 113873.0 |
| glycoside hydrolase | BKM63_20515 | Not Available | Positive | 4790470 - 4793277 | 106082.0 |
| family 88 glycosyl hydrolase | BKM63_20520 | Not Available | Positive | 4793284 - 4794408 | 42927.3 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
