Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_20225 | Not Available | Negative | 4710164 - 4711087 | 35601.7 |
| duf4861 domain-containing protein | BKM63_20230 | Not Available | Positive | 4711273 - 4712442 | 43335.1 |
| laci family transcriptional regulator | BKM63_20235 | Not Available | Negative | 4712549 - 4713580 | 39671.6 |
| hypothetical protein | BKM63_20240 | Not Available | Positive | 4713774 - 4714226 | 17378.7 |
| d-mannonate oxidoreductase | BKM63_20245 | Not Available | Positive | 4714505 - 4715317 | 28870.0 |
| mannonate dehydratase | BKM63_20250 | Not Available | Positive | 4715350 - 4716534 | 44477.1 |
| hypothetical protein | BKM63_20255 | Not Available | Positive | 4716708 - 4718339 | 61121.2 |
| hybrid sensor histidine kinase/response regulator | BKM63_20260 | Not Available | Positive | 4718588 - 4722679 | 154976.0 |
| susc/raga family protein | BKM63_20265 | Not Available | Positive | 4722893 - 4725895 | 108735.0 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_20270 | Not Available | Positive | 4725911 - 4727431 | 56476.7 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
