Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | BKM63_20170 | Not Available | Negative | 4690715 - 4691239 | 20901.1 |
| hypothetical protein | BKM63_20175 | Not Available | Positive | 4691507 - 4692568 | 39955.4 |
| metallophosphatase | BKM63_20180 | Not Available | Negative | 4692775 - 4694691 | 73305.6 |
| crp/fnr family transcriptional regulator | BKM63_20185 | Not Available | Positive | 4694869 - 4695456 | 22929.3 |
| nad-dependent dehydratase | BKM63_20190 | Not Available | Positive | 4695534 - 4696604 | 40596.7 |
| glycoside hydrolase | BKM63_20195 | Not Available | Negative | 4696695 - 4698317 | 57605.7 |
| carbohydrate-binding protein | BKM63_20200 | Not Available | Negative | 4698525 - 4701197 | 95893.3 |
| abc transporter substrate-binding protein | BKM63_20210 | Not Available | Negative | 4705565 - 4708492 | 112715.0 |
| haloacid dehalogenase | BKM63_20215 | Not Available | Negative | 4708903 - 4709541 | 23866.4 |
| nudix hydrolase | BKM63_20220 | Not Available | Negative | 4709635 - 4710099 | 17672.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
