Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | BKM63_19915 | Not Available | Negative | 4633225 - 4634022 | 28600.2 |
| alcohol dehydrogenase | BKM63_19920 | Not Available | Negative | 4634208 - 4635221 | 37175.1 |
| ureidoglycolate lyase | BKM63_19925 | Not Available | Negative | 4635434 - 4636288 | 31150.3 |
| short-chain dehydrogenase | BKM63_19930 | Not Available | Negative | 4636455 - 4637219 | 27056.4 |
| abc transporter substrate-binding protein | BKM63_19935 | Not Available | Positive | 4637545 - 4638693 | 42699.9 |
| carnitine dehydratase | BKM63_19940 | Not Available | Positive | 4638690 - 4639832 | 41971.9 |
| coa transferase | BKM63_19945 | Not Available | Positive | 4639961 - 4641097 | 42048.7 |
| abc transporter substrate-binding protein | BKM63_19950 | Not Available | Positive | 4641100 - 4642326 | 46710.3 |
| oxidoreductase | BKM63_19955 | Not Available | Positive | 4642406 - 4643473 | 39832.1 |
| dehydratase | BKM63_19960 | Not Available | Positive | 4643592 - 4644032 | 16475.8 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
