Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-rhamnosidase | BKM63_19860 | Not Available | Negative | 4614984 - 4617170 | 84002.3 |
| arac family transcriptional regulator | BKM63_19865 | Not Available | Negative | 4617523 - 4618341 | 31068.6 |
| mfs transporter | BKM63_19870 | Not Available | Positive | 4618443 - 4619657 | 44016.0 |
| phosphatidylserine decarboxylase | BKM63_19875 | Not Available | Positive | 4620051 - 4621421 | 50547.0 |
| hypothetical protein | BKM63_19880 | Not Available | Positive | 4621570 - 4623459 | 71579.4 |
| oxidoreductase | BKM63_19890 | Not Available | Negative | 4625139 - 4626203 | 40055.4 |
| hypothetical protein | BKM63_19895 | Not Available | Negative | 4626361 - 4628874 | 95494.6 |
| glycoside hydrolase | BKM63_19900 | Not Available | Positive | 4629318 - 4631000 | 61520.7 |
| pectate lyase | BKM63_19905 | Not Available | Positive | 4631112 - 4632200 | 42070.0 |
| amidohydrolase | BKM63_19910 | Not Available | Negative | 4632382 - 4633218 | 32395.2 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
