Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| six-hairpin glycosidase | BKM63_19760 | Not Available | Negative | 4574240 - 4576102 | 70333.0 |
| arabinosidase | BKM63_19765 | Not Available | Negative | 4576252 - 4577169 | 35095.0 |
| polygalacturonase | BKM63_19770 | Not Available | Negative | 4577231 - 4578799 | 57759.0 |
| glycoside hydrolase | BKM63_19775 | Not Available | Negative | 4578994 - 4580397 | 53275.1 |
| pectate lyase | BKM63_19780 | Not Available | Negative | 4580614 - 4583703 | 115905.0 |
| polysaccharide lyase | BKM63_19785 | Not Available | Negative | 4584063 - 4585769 | 63060.6 |
| hypothetical protein | BKM63_19790 | Not Available | Negative | 4585824 - 4586513 | 26120.2 |
| polysaccharide lyase | BKM63_19795 | Not Available | Negative | 4586654 - 4588363 | 63488.3 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_19800 | Not Available | Negative | 4588463 - 4590463 | 73947.3 |
| susc/raga family tonb-linked outer membrane protein | BKM63_19805 | Not Available | Negative | 4590477 - 4593848 | 124530.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
