Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| circadian clock protein kaib | BKM63_19455 | Not Available | Positive | 4493067 - 4493360 | 10989.6 |
| circadian clock protein kaib | BKM63_19460 | Not Available | Positive | 4493363 - 4493659 | 11107.5 |
| pas domain-containing sensor histidine kinase | BKM63_19465 | Not Available | Positive | 4493663 - 4494919 | 47273.9 |
| response regulator | BKM63_19470 | Not Available | Positive | 4494921 - 4495325 | 14986.8 |
| hypothetical protein | BKM63_19475 | Not Available | Positive | 4495611 - 4496120 | 19895.6 |
| hypothetical protein | BKM63_19480 | Not Available | Negative | 4496190 - 4498667 | 90397.6 |
| osmc family peroxiredoxin | BKM63_19485 | Not Available | Positive | 4499067 - 4499483 | 14894.7 |
| alpha/beta hydrolase | BKM63_19490 | Not Available | Positive | 4499569 - 4500339 | 27385.7 |
| lysr family transcriptional regulator | BKM63_19495 | Not Available | Negative | 4500404 - 4501375 | 36971.3 |
| hypothetical protein | BKM63_19500 | Not Available | Negative | 4501758 - 4502483 | 27506.2 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
