Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| selenocysteine lyase | BKM63_19355 | Not Available | Negative | 4472689 - 4474161 | 55271.9 |
| alkyl hydroperoxide reductase | BKM63_19360 | Not Available | Negative | 4474449 - 4475438 | 37222.8 |
| 2-nitropropane dioxygenase | BKM63_19365 | Not Available | Negative | 4476171 - 4477256 | 39196.3 |
| hypothetical protein | BKM63_19370 | Not Available | Negative | 4477273 - 4477722 | 16956.5 |
| glucose dehydrogenase | BKM63_19375 | Not Available | Negative | 4477724 - 4478458 | 25855.0 |
| 4-oxalocrotonate tautomerase | BKM63_19380 | Not Available | Negative | 4478464 - 4478682 | 8144.87 |
| lipid-binding protein | BKM63_19385 | Not Available | Negative | 4478687 - 4479241 | 20222.5 |
| crp/fnr family transcriptional regulator | BKM63_19390 | Not Available | Negative | 4479477 - 4480049 | 22189.7 |
| hypothetical protein | BKM63_19395 | Not Available | Positive | 4480220 - 4480606 | 14593.4 |
| short-chain dehydrogenase/reductase | BKM63_19400 | Not Available | Positive | 4480922 - 4481800 | 31874.2 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
