Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic nucleotide-binding protein | BKM63_19090 | Not Available | Positive | 4414169 - 4414744 | 22143.8 |
| short-chain dehydrogenase/reductase | BKM63_19095 | Not Available | Positive | 4414857 - 4415714 | 30904.0 |
| formate dehydrogenase family accessory protein fdhd | BKM63_19100 | Not Available | Positive | 4415910 - 4416782 | 31835.2 |
| hypothetical protein | BKM63_19105 | Not Available | Positive | 4416832 - 4419198 | 87694.3 |
| alpha/beta hydrolase | BKM63_19110 | Not Available | Positive | 4419396 - 4420214 | 30431.0 |
| hypothetical protein | BKM63_19115 | Not Available | Negative | 4420335 - 4421759 | 51928.0 |
| susc/raga family tonb-linked outer membrane protein | BKM63_19120 | Not Available | Negative | 4421771 - 4424950 | 115654.0 |
| dna-binding protein | BKM63_19125 | Not Available | Negative | 4425736 - 4426260 | 19334.3 |
| hypothetical protein | BKM63_19130 | Not Available | Positive | 4426377 - 4427597 | 45428.4 |
| hypothetical protein | BKM63_19135 | Not Available | Negative | 4427802 - 4427996 | 7566.41 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
