Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein | BKM63_18935 | Not Available | Negative | 4377521 - 4379293 | 67789.3 |
| universal stress protein uspa | BKM63_18940 | Not Available | Negative | 4379363 - 4380196 | 31962.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | BKM63_18945 | Not Available | Positive | 4380380 - 4381780 | 51322.6 |
| rrna methyltransferase | BKM63_18950 | Not Available | Negative | 4381837 - 4382295 | 17306.7 |
| tonb-dependent receptor | BKM63_18955 | Not Available | Negative | 4383198 - 4385573 | 89889.8 |
| regulator | BKM63_18960 | Not Available | Positive | 4385632 - 4387344 | 65955.1 |
| dna-binding response regulator | BKM63_18965 | Not Available | Positive | 4387341 - 4388036 | 26541.5 |
| hypothetical protein | BKM63_18970 | Not Available | Negative | 4388097 - 4389113 | 38479.8 |
| rna polymerase subunit sigma-70 | BKM63_18975 | Not Available | Positive | 4389293 - 4389808 | 19794.7 |
| iron dicitrate transport regulator fecr | BKM63_18980 | Not Available | Positive | 4389859 - 4390758 | 34328.1 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
