Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_18665 | Not Available | Negative | 4311387 - 4311986 | 23021.9 |
| penicillin-binding protein | BKM63_18675 | Not Available | Negative | 4312701 - 4313720 | 38072.9 |
| endopeptidase la | BKM63_18680 | Not Available | Negative | 4313931 - 4316384 | 91397.7 |
| hypothetical protein | BKM63_18685 | Not Available | Negative | 4316622 - 4317311 | 25284.8 |
| rna polymerase subunit sigma | BKM63_18690 | Not Available | Positive | 4317483 - 4318037 | 21711.9 |
| anti-sigma factor | BKM63_18695 | Not Available | Positive | 4318034 - 4318570 | 20953.0 |
| hypothetical protein | BKM63_18700 | Not Available | Positive | 4318554 - 4319612 | 39128.1 |
| duf2807 domain-containing protein | BKM63_18705 | Not Available | Positive | 4319633 - 4320361 | 25388.2 |
| mfs transporter | BKM63_18710 | Not Available | Negative | 4320449 - 4321774 | 49547.4 |
| peptidase m48 | BKM63_18715 | Not Available | Negative | 4321928 - 4322737 | 28818.6 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
