Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | BKM63_01770 | Not Available | Positive | 375231 - 375803 | 21590.2 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | BKM63_01775 | Not Available | Positive | 375826 - 376281 | 17318.8 |
| hypothetical protein | BKM63_01780 | Not Available | Positive | 376358 - 377164 | 31345.2 |
| abc transporter atp-binding protein | BKM63_01785 | Not Available | Negative | 377161 - 377940 | 28785.1 |
| iron abc transporter | BKM63_01790 | Not Available | Negative | 378066 - 379034 | 34412.3 |
| abc transporter substrate-binding protein | BKM63_01795 | Not Available | Negative | 379096 - 380238 | 42864.1 |
| hypothetical protein | BKM63_01800 | Not Available | Positive | 380333 - 380695 | 13505.0 |
| adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase | BKM63_01805 | Not Available | Positive | 380816 - 381325 | 19187.9 |
| 5,6-dimethylbenzimidazole synthase | BKM63_01810 | Not Available | Positive | 381446 - 383125 | 61580.0 |
| adenosylcobinamide-gdp ribazoletransferase | BKM63_01815 | Not Available | Positive | 383261 - 384046 | 29927.9 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
