Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyladenosine dehydratase | BKM63_18565 | Not Available | Negative | 4292740 - 4293456 | 26340.4 |
| hydrolase tatd | BKM63_18570 | Not Available | Negative | 4293561 - 4294211 | 25319.8 |
| hypothetical protein | BKM63_18575 | Not Available | Negative | 4294211 - 4294810 | 23104.8 |
| mfs transporter | BKM63_18580 | Not Available | Positive | 4294908 - 4296125 | 45598.3 |
| transcriptional regulator | BKM63_18585 | Not Available | Positive | 4296293 - 4296661 | 14419.2 |
| peptidase m56 | BKM63_18590 | Not Available | Positive | 4296667 - 4298247 | 59504.5 |
| transcriptional regulator | BKM63_18595 | Not Available | Positive | 4298274 - 4298642 | 14237.0 |
| peptidase m56 | BKM63_18600 | Not Available | Positive | 4298648 - 4300321 | 64429.5 |
| hypothetical protein | BKM63_18605 | Not Available | Negative | 4300349 - 4300534 | 7224.71 |
| ssra-binding protein | BKM63_18610 | Not Available | Positive | 4300492 - 4300632 | 5270.77 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
