Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-2-naphthoyl-coa synthase | BKM63_18410 | Not Available | Negative | 4260525 - 4261358 | 30887.7 |
| gntr family transcriptional regulator | BKM63_18415 | Not Available | Negative | 4262087 - 4262941 | 32888.8 |
| hypothetical protein | BKM63_18420 | Not Available | Negative | 4263082 - 4263426 | 12659.3 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | BKM63_18425 | Not Available | Negative | 4263521 - 4265185 | 61939.9 |
| thioredoxin | BKM63_18430 | Not Available | Positive | 4265363 - 4266538 | 45317.5 |
| n-acetyltransferase | BKM63_18435 | Not Available | Positive | 4266612 - 4267109 | 18512.4 |
| glutathione peroxidase | BKM63_18440 | Not Available | Negative | 4267231 - 4267818 | 22139.7 |
| rna polymerase subunit sigma-70 | BKM63_18445 | Not Available | Positive | 4268581 - 4269111 | 20739.9 |
| anti-sigma factor | BKM63_18450 | Not Available | Positive | 4269111 - 4269899 | 28793.6 |
| doxx family protein | BKM63_18455 | Not Available | Positive | 4269983 - 4270366 | 14041.8 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
