Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline dehydrogenase | BKM63_18260 | Not Available | Negative | 4229239 - 4230408 | 44451.3 |
| 3-dehydroquinate synthase | BKM63_18265 | Not Available | Positive | 4230684 - 4231751 | 40017.1 |
| hypothetical protein | BKM63_18270 | Not Available | Positive | 4231809 - 4231988 | 7149.65 |
| arginine decarboxylase | BKM63_18275 | Not Available | Positive | 4232058 - 4233461 | 54550.0 |
| deoxyhypusine synthase | BKM63_18280 | Not Available | Positive | 4233570 - 4234538 | 36674.9 |
| dna primase | BKM63_18285 | Not Available | Positive | 4234548 - 4234955 | 15461.9 |
| atp-dependent dna helicase recq | BKM63_18290 | Not Available | Positive | 4235094 - 4237211 | 80034.2 |
| damage-inducible protein dinb | BKM63_18295 | Not Available | Negative | 4237326 - 4237841 | 20092.7 |
| phosphoenolpyruvate carboxylase | BKM63_18300 | Not Available | Negative | 4237874 - 4240459 | 98766.9 |
| transcriptional regulator | BKM63_18305 | Not Available | Negative | 4240552 - 4241031 | 18173.3 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
