Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | BKM63_17960 | Not Available | Positive | 4167982 - 4168572 | 21674.2 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | BKM63_17965 | Not Available | Positive | 4168662 - 4169390 | 26498.7 |
| imidazole glycerol phosphate synthase subunit hisf | BKM63_17970 | Not Available | Positive | 4169472 - 4170227 | 26999.4 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase | BKM63_17975 | Not Available | Positive | 4170321 - 4170917 | 22288.4 |
| hypothetical protein | BKM63_17980 | Not Available | Positive | 4171054 - 4171629 | 22168.8 |
| hypothetical protein | BKM63_17985 | Not Available | Negative | 4171802 - 4172500 | 26189.2 |
| peptidase m1 | BKM63_17990 | Not Available | Positive | 4172665 - 4174320 | 63554.0 |
| hypothetical protein | BKM63_17995 | Not Available | Negative | 4174435 - 4175979 | 61830.9 |
| 2-isopropylmalate synthase | BKM63_18000 | Not Available | Positive | 4176135 - 4177310 | 42684.3 |
| 3-isopropylmalate dehydrogenase | BKM63_18005 | Not Available | Positive | 4177401 - 4178519 | 41013.3 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
