Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene synthase | BKM63_01670 | Not Available | Positive | 355415 - 356254 | 32413.1 |
| carotene hydroxylase | BKM63_01675 | Not Available | Positive | 356330 - 356770 | 17748.1 |
| hypothetical protein | BKM63_01680 | Not Available | Positive | 356901 - 357368 | 18357.3 |
| deoxyribodipyrimidine photolyase | BKM63_01685 | Not Available | Positive | 357448 - 358743 | 50485.8 |
| abc transporter | BKM63_01690 | Not Available | Negative | 358969 - 360273 | 49930.7 |
| heat-shock protein | BKM63_01695 | Not Available | Negative | 360273 - 360932 | 26135.3 |
| tigr01777 family protein | BKM63_01700 | Not Available | Positive | 361031 - 361942 | 33740.7 |
| hypothetical protein | BKM63_01705 | Not Available | Negative | 361944 - 362516 | 21556.3 |
| glyoxalase | BKM63_01710 | Not Available | Negative | 362743 - 363138 | 14518.2 |
| acyl-coa thioesterase | BKM63_01715 | Not Available | Negative | 363180 - 363728 | 20109.3 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
