Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase | BKM63_17460 | Not Available | Positive | 4045884 - 4046441 | 21921.3 |
| hypothetical protein | BKM63_17465 | Not Available | Positive | 4046438 - 4046776 | 12849.3 |
| 30s ribosomal protein s15 | BKM63_17470 | Not Available | Positive | 4046786 - 4047106 | 12503.2 |
| dna-binding protein | BKM63_17475 | Not Available | Negative | 4047159 - 4048055 | 34318.3 |
| dna topoisomerase iii | BKM63_17480 | Not Available | Negative | 4048069 - 4050138 | 77777.0 |
| hypothetical protein | BKM63_17485 | Not Available | Negative | 4050145 - 4051563 | 53930.7 |
| dna-binding protein | BKM63_17490 | Not Available | Negative | 4051645 - 4051953 | 12173.7 |
| tetracycline regulation of excision, rtec | BKM63_17495 | Not Available | Negative | 4052181 - 4053032 | 33377.1 |
| aminotransferase class i/ii | BKM63_17500 | Not Available | Negative | 4053134 - 4055560 | 92944.6 |
| hypothetical protein | BKM63_17505 | Not Available | Positive | 4055806 - 4056189 | 14320.2 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
