Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidylprolyl isomerase | BKM63_01620 | Not Available | Negative | 348287 - 349447 | 43237.9 |
| rna-binding protein | BKM63_01625 | Not Available | Positive | 349527 - 349919 | 15344.3 |
| phosphoribosyltransferase | BKM63_01630 | Not Available | Positive | 350064 - 350564 | 18617.5 |
| shikimate kinase | BKM63_01635 | Not Available | Negative | 350556 - 351074 | 19880.2 |
| Trna-lys | Not Available | Not Available | Positive | 351202 - 351277 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 351319 - 351394 | Not Available |
| hypothetical protein | BKM63_01650 | Not Available | Negative | 351471 - 352022 | 21268.8 |
| hypothetical protein | BKM63_01655 | Not Available | Positive | 352333 - 352803 | 17011.0 |
| merr family transcriptional regulator | BKM63_01660 | Not Available | Positive | 353008 - 353907 | 35522.6 |
| phytoene dehydrogenase | BKM63_01665 | Not Available | Positive | 353945 - 355411 | 55704.9 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
