Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BKM63_16920 | Not Available | Positive | 3941055 - 3941303 | 9434.21 |
| hypothetical protein | BKM63_16925 | Not Available | Negative | 3941605 - 3943992 | 91852.6 |
| hypothetical protein | BKM63_16930 | Not Available | Negative | 3944141 - 3944365 | 7934.64 |
| hypothetical protein | BKM63_16935 | Not Available | Negative | 3944352 - 3944558 | 7550.8 |
| duf3606 domain-containing protein | BKM63_16940 | Not Available | Negative | 3944563 - 3944745 | 6845.78 |
| alpha-ketoglutarate-dependent dioxygenase alkb | BKM63_16945 | Not Available | Negative | 3944874 - 3945488 | 24107.7 |
| dna polymerase iii subunit alpha | BKM63_16950 | Not Available | Negative | 3945557 - 3948613 | 116941.0 |
| dna polymerase iv | BKM63_16955 | Not Available | Negative | 3948614 - 3949798 | 45011.9 |
| hypothetical protein | BKM63_16960 | Not Available | Positive | 3950133 - 3950588 | 16935.2 |
| nadph:quinone reductase | BKM63_16965 | Not Available | Negative | 3951007 - 3951597 | 22779.2 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
