Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | BKM63_16370 | Not Available | Negative | 3799833 - 3802025 | 82855.1 |
| hypothetical protein | BKM63_16375 | Not Available | Negative | 3802035 - 3803249 | 48141.9 |
| hypothetical protein | BKM63_16380 | Not Available | Negative | 3803448 - 3804692 | 47677.9 |
| hypothetical protein | BKM63_16385 | Not Available | Negative | 3804702 - 3805565 | 32798.8 |
| hypothetical protein | BKM63_16390 | Not Available | Negative | 3805558 - 3808662 | 121942.0 |
| hypothetical protein | BKM63_16395 | Not Available | Negative | 3808665 - 3809630 | 37952.5 |
| short-chain dehydrogenase | BKM63_16400 | Not Available | Positive | 3810366 - 3811154 | 28287.4 |
| phytanoyl-coa dioxygenase | BKM63_16405 | Not Available | Positive | 3811384 - 3812190 | 30425.5 |
| cdp-alcohol phosphatidyltransferase | BKM63_16410 | Not Available | Positive | 3812344 - 3813030 | 25647.7 |
| polysaccharide biosynthesis protein gtra | BKM63_16415 | Not Available | Positive | 3813032 - 3813463 | 16251.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
