Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter periplasmic adaptor subunit | BKM63_15505 | Not Available | Positive | 3580291 - 3581508 | 44407.9 |
| cadmium-translocating p-type atpase | BKM63_15510 | Not Available | Positive | 3581750 - 3583747 | 71963.8 |
| hypothetical protein | BKM63_15515 | Not Available | Positive | 3583978 - 3585051 | 40919.6 |
| tautomerase family protein | BKM63_15520 | Not Available | Negative | 3585071 - 3585469 | 15019.0 |
| hypothetical protein | BKM63_15525 | Not Available | Negative | 3585581 - 3587059 | 55416.1 |
| cytochrome-c peroxidase | BKM63_15530 | Not Available | Negative | 3587247 - 3588356 | 41876.8 |
| hypothetical protein | BKM63_15535 | Not Available | Negative | 3588544 - 3590010 | 54289.7 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_15540 | Not Available | Negative | 3589997 - 3591496 | 55651.7 |
| susc/raga family tonb-linked outer membrane protein | BKM63_15545 | Not Available | Negative | 3591483 - 3594836 | 123385.0 |
| iron dicitrate transport regulator fecr | BKM63_15550 | Not Available | Negative | 3594846 - 3595949 | 41279.1 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
