Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | BKM63_15355 | Not Available | Negative | 3548897 - 3549487 | 21803.5 |
| arac family transcriptional regulator | BKM63_15360 | Not Available | Positive | 3549662 - 3550534 | 33467.1 |
| cupin | BKM63_15365 | Not Available | Positive | 3550752 - 3551144 | 14273.7 |
| hypothetical protein | BKM63_15370 | Not Available | Positive | 3551171 - 3551578 | 15272.0 |
| duf305 domain-containing protein | BKM63_15375 | Not Available | Negative | 3551727 - 3552314 | 21648.7 |
| rho termination factor | BKM63_15380 | Not Available | Positive | 3552629 - 3552868 | 8946.64 |
| dna topoisomerase i | BKM63_15385 | Not Available | Positive | 3552982 - 3554064 | 42250.0 |
| duf1328 domain-containing protein | BKM63_15390 | Not Available | Positive | 3554174 - 3554335 | 5699.47 |
| hypothetical protein | BKM63_15395 | Not Available | Positive | 3554425 - 3555072 | 24845.3 |
| hypothetical protein | BKM63_15400 | Not Available | Negative | 3555141 - 3555695 | 21877.9 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
