Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | BKM63_15255 | Not Available | Positive | 3523150 - 3523824 | 25317.9 |
| two-component sensor histidine kinase | BKM63_15260 | Not Available | Positive | 3523826 - 3525229 | 53220.4 |
| hypothetical protein | BKM63_15265 | Not Available | Positive | 3525307 - 3526029 | 27709.4 |
| hypothetical protein | BKM63_15270 | Not Available | Positive | 3526244 - 3527191 | 36680.0 |
| gntr family transcriptional regulator | BKM63_15275 | Not Available | Negative | 3527286 - 3528710 | 53143.3 |
| permease | BKM63_15280 | Not Available | Positive | 3528811 - 3529728 | 34719.6 |
| acyl-coa oxidase | BKM63_15285 | Not Available | Positive | 3529969 - 3532233 | 84855.0 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | BKM63_15290 | Not Available | Negative | 3532348 - 3532692 | 13013.7 |
| hypothetical protein | BKM63_15295 | Not Available | Positive | 3532822 - 3534465 | 63838.4 |
| glycosyl hydrolase | BKM63_15300 | Not Available | Positive | 3534670 - 3536886 | 81289.9 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
