Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | BKM63_15155 | Not Available | Negative | 3499271 - 3499669 | 15101.8 |
| atp-dependent chaperone clpb | BKM63_15160 | Not Available | Positive | 3499873 - 3502476 | 97455.5 |
| hypothetical protein | BKM63_15165 | Not Available | Positive | 3502833 - 3503714 | 31539.8 |
| hypothetical protein | BKM63_15170 | Not Available | Positive | 3504013 - 3504426 | 15115.2 |
| acyltransferase | BKM63_15175 | Not Available | Positive | 3504611 - 3505501 | 33581.9 |
| flagellar motor protein motb | BKM63_15180 | Not Available | Negative | 3505618 - 3506877 | 45406.1 |
| alkaline phosphatase | BKM63_15185 | Not Available | Negative | 3507080 - 3508600 | 54749.0 |
| agmatine deiminase | BKM63_15190 | Not Available | Positive | 3508788 - 3509828 | 39221.0 |
| endonuclease | BKM63_15195 | Not Available | Positive | 3510041 - 3511225 | 44589.6 |
| fumarylacetoacetase | BKM63_15200 | Not Available | Negative | 3511332 - 3512615 | 48210.2 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
