Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxychorismate lyase | BKM63_01425 | Not Available | Negative | 308083 - 309123 | 39923.2 |
| gnat family n-acetyltransferase | BKM63_01430 | Not Available | Negative | 309135 - 309668 | 20613.5 |
| diaminopimelate epimerase | BKM63_01435 | Not Available | Negative | 309740 - 310522 | 28589.5 |
| serine protease | BKM63_01440 | Not Available | Positive | 310695 - 312095 | 50500.3 |
| type i glyceraldehyde-3-phosphate dehydrogenase | BKM63_01445 | Not Available | Positive | 312323 - 313771 | 53517.3 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 312513 - 314030 | Not Available |
| asnc family transcriptional regulator | BKM63_01450 | Not Available | Negative | 313845 - 314303 | 17481.3 |
| alanine dehydrogenase | BKM63_01455 | Not Available | Positive | 314503 - 315621 | 39878.8 |
| alkaline phosphatase | BKM63_01460 | Not Available | Negative | 315745 - 317364 | 60771.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 317708 - 317817 | Not Available |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
