Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-[acyl-carrier-protein] thioesterase | BKM63_15000 | Not Available | Negative | 3468658 - 3469404 | 28920.2 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | BKM63_15005 | Not Available | Negative | 3469458 - 3470396 | 36273.2 |
| ion transporter | BKM63_15010 | Not Available | Negative | 3470552 - 3471391 | 31546.7 |
| exonuclease | BKM63_15015 | Not Available | Negative | 3471422 - 3472783 | 51952.2 |
| four helix bundle protein | BKM63_15020 | Not Available | Negative | 3472874 - 3473221 | 13356.1 |
| yggs family pyridoxal phosphate enzyme | BKM63_15025 | Not Available | Negative | 3473287 - 3473946 | 24716.0 |
| 3-hydroxybutyryl-coa dehydrogenase | BKM63_15030 | Not Available | Negative | 3473959 - 3474846 | 32005.5 |
| oxidoreductase | BKM63_15035 | Not Available | Negative | 3474934 - 3475899 | 36039.3 |
| protein-l-isoaspartate o-methyltransferase | BKM63_15040 | Not Available | Positive | 3476111 - 3476752 | 23998.2 |
| dna-binding protein | BKM63_15045 | Not Available | Negative | 3476781 - 3477785 | 38758.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
